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A B C D E F G H I L M N O P R S T W Y Z
| apc.fit | Fit an Age-Period-Cohort model to tabular data. |
| apc.frame | Produce an empty frame for display of parameter-estimates from Age-Period-Cohort-models. |
| apc.lines | Plot APC-estimates in an APC-frame. |
| apc.plot | Plot the estimates from a fitted Age-Period-Cohort model |
| Aplot | Functions to plot rates from a table classified by age and calendar time (period) |
| as.Date.cal.yr | Functions to convert character, factor and various date objects into a number, and vice versa. |
| B.dk | Births in Denmark by year and month of birth and sex |
| bdendo | A case-control study of endometrial cancer |
| bdendo11 | A 1:1 subset of the endometrial cancer case-control study |
| births | Births in a London Hospital |
| blcaIT | Bladder cancer mortality in Italian males |
| boxarr | Draw boxes and arrows for illustration of multistate models. |
| boxes | Draw boxes and arrows for illustration of multistate models. |
| boxes.Lexis | Draw boxes and arrows for illustration of multistate models. |
| boxes.matrix | Draw boxes and arrows for illustration of multistate models. |
| boxes.MS | Draw boxes and arrows for illustration of multistate models. |
| breaks | Extract time band data from a split Lexis object |
| brv | Bereavement in an elderly cohort |
| cal.yr | Functions to convert character, factor and various date objects into a number, and vice versa. |
| ccwc | Generate a nested case-control study |
| ci.cum | Compute cumulative sum of estimates. |
| ci.exp | Compute linear functions of parameters with standard erros and confidence limits |
| ci.lin | Compute linear functions of parameters with standard erros and confidence limits |
| ci.mat | Compute linear functions of parameters with standard erros and confidence limits |
| ci.pd | Compute confidence limits for a difference of two independent proportions. |
| ci.pred | Compute linear functions of parameters with standard erros and confidence limits |
| clear | Functions to manage and explore the workspace |
| clogistic | Conditional logistic regression |
| contr.2nd | Contrast matrices |
| contr.cum | Contrast matrices |
| contr.diff | Contrast matrices |
| contr.orth | Contrast matrices |
| count | Special functions for use in stat.table |
| countLexis | Cut follow-up at a specified date for each person. |
| cp.lines | Plot period and cohort effects in an APC-frame. |
| cp.matlines | Plot period and cohort effects in an APC-frame. |
| cp.matpoints | Plot period and cohort effects in an APC-frame. |
| cp.points | Plot period and cohort effects in an APC-frame. |
| Cplot | Functions to plot rates from a table classified by age and calendar time (period) |
| crr.Lexis | Fit a competing risks regression model (Fine-Gray model) using a Lexis object) |
| cutLexis | Cut follow-up at a specified date for each person. |
| dbox | Draw boxes and arrows for illustration of multistate models. |
| detrend | Projection of a model matrix on to the orthogonal complement of a trend. |
| diet | Diet and heart data |
| DMconv | Conversion to diabetes |
| DMlate | The Danish National Diabetes Register. |
| DMrand | The Danish National Diabetes Register. |
| dur | Time series methods for Lexis objects |
| effx | Function to calculate effects |
| effx.match | Function to calculate effects for individually matched case-control studies |
| entry | Time series methods for Lexis objects |
| etm | Create a data structures suitable for use with packages mstate, etm. |
| etm.Lexis | Create a data structures suitable for use with packages mstate, etm. |
| ewrates | Rates of lung and nasal cancer mortality, and total mortality. |
| exit | Time series methods for Lexis objects |
| expand.data | Function to expand data for regression analysis of interval censored data. |
| factorize | Transform a Lexis (or stacked.Lexis) objects |
| factorize.Lexis | Transform a Lexis (or stacked.Lexis) objects |
| fillarr | Draw boxes and arrows for illustration of multistate models. |
| fit.add | Fit an addive excess risk model to interval censored data. |
| fit.baseline | Fit a piecewise contsnt intesity model for interval censored data. |
| fit.mult | Fits a multiplicative relative risk model to interval censored data. |
| float | Calculate floated variances |
| ftrend | Fit a floating trend to a factor in generalized linear model |
| gen.exp | Generate covariates for drug-exposure follow-up from drug purchase records. |
| gmortDK | Population mortality rates for Denmark in 5-years age groups. |
| hivDK | hivDK: seroconversion in a cohort of Danish men |
| Icens | Fits a regression model to interval censored data. |
| lep | An unmatched case-control study of leprosy incidence |
| levels.Lexis | Transform a Lexis (or stacked.Lexis) objects |
| Lexis | Create a Lexis object |
| Lexis.diagram | Plot a Lexis diagram |
| Lexis.lines | Draw life lines in a Lexis diagram. |
| Life.lines | Compute dates/ages for life lines in a Lexis diagram |
| lines.apc | Plot APC-estimates in an APC-frame. |
| lines.Lexis | Lexis diagrams |
| lines.pState | Simulate a Lexis object representing follow-up in a multistate model. |
| linesEst | Plot estimates with confidence limits (forest plot) |
| lls | Functions to manage and explore the workspace |
| lungDK | Male lung cancer incidence in Denmark |
| M.dk | Mortality in Denmark 1974 ff. |
| merge.data.frame | Merge data frame with a Lexis object |
| merge.Lexis | Merge a Lexis object with a data frame |
| mh | Mantel-Haenszel analyses of cohort and case-control studies |
| mortDK | Population mortality rates for Denmark in 1-year age-classes. |
| msdata | Create a data structures suitable for use with packages mstate, etm. |
| msdata.Lexis | Create a data structures suitable for use with packages mstate, etm. |
| N.dk | Population size in Denmark |
| N2Y | Create risk time (Person-Years) in Lexis triangles from population data. |
| NArray | Set up an array of NAs, solely from the list of dimnames |
| ncut | Function to group a variable in intervals. |
| nice | Nice breakpoints |
| nickel | A Cohort of Nickel Smelters in South Wales |
| Ns | Natural splines - cubic splines, made linear beyond outermost knots. |
| nState | Simulate a Lexis object representing follow-up in a multistate model. |
| occup | A small occupational cohort |
| pc.lines | Plot period and cohort effects in an APC-frame. |
| pc.matlines | Plot period and cohort effects in an APC-frame. |
| pc.matpoints | Plot period and cohort effects in an APC-frame. |
| pc.points | Plot period and cohort effects in an APC-frame. |
| pctab | Create percentages in a table |
| percent | Special functions for use in stat.table |
| plot.apc | Plot the estimates from a fitted Age-Period-Cohort model |
| plot.Lexis | Lexis diagrams |
| plot.pState | Simulate a Lexis object representing follow-up in a multistate model. |
| plotEst | Plot estimates with confidence limits (forest plot) |
| plotevent | Plot Equivalence Classes |
| points.Lexis | Lexis diagrams |
| pointsEst | Plot estimates with confidence limits (forest plot) |
| Pplot | Functions to plot rates from a table classified by age and calendar time (period) |
| print.floated | Calculate floated variances |
| print.Icens | Fits a regression model to interval censored data. |
| print.stat.table | Tables of summary statistics |
| print.summary.Lexis | Summarize transitions and risk time from a Lexis object |
| projection.ip | Projection of columns of a matrix. |
| pState | Simulate a Lexis object representing follow-up in a multistate model. |
| PY.ann | Lexis diagrams |
| PY.ann.Lexis | Lexis diagrams |
| rateplot | Functions to plot rates from a table classified by age and calendar time (period) |
| ratio | Special functions for use in stat.table |
| Relevel | Reorder and combine levels of a factor |
| Relevel.factor | Reorder and combine levels of a factor |
| Relevel.Lexis | Transform a Lexis (or stacked.Lexis) objects |
| ROC | Function to compute and draw ROC-curves. |
| S.typh | Salmonella Typhimurium outbreak 1996 in Denmark. |
| simLexis | Simulate a Lexis object representing follow-up in a multistate model. |
| splitLexis | Split follow-up time in a Lexis object |
| stack.Lexis | Functions to facilitate analysis of multistate models. |
| stat.table | Tables of summary statistics |
| status | Time series methods for Lexis objects |
| subset.Lexis | Subsetting Lexis (and stacked.Lexis) objects |
| subset.stacked.Lexis | Subsetting Lexis (and stacked.Lexis) objects |
| summary.Lexis | Summarize transitions and risk time from a Lexis object |
| tbox | Draw boxes and arrows for illustration of multistate models. |
| testisDK | Testis cancer incidence in Denmark, 1943-1996 |
| thoro | Thorotrast Study |
| timeBand | Extract time band data from a split Lexis object |
| timeScales | The time scales of a Lexis object |
| tmat | Functions to facilitate analysis of multistate models. |
| tmat.Lexis | Functions to facilitate analysis of multistate models. |
| transform.Lexis | Transform a Lexis (or stacked.Lexis) objects |
| transform.stacked.Lexis | Transform a Lexis (or stacked.Lexis) objects |
| twoby2 | Analysis of a two by two table |
| Wald | Compute linear functions of parameters with standard erros and confidence limits |
| Y.dk | Population risk time in Denmark |
| ZArray | Set up an array of NAs, solely from the list of dimnames |