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elxTransformixMain.h
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1 /*=========================================================================
2  *
3  * Copyright UMC Utrecht and contributors
4  *
5  * Licensed under the Apache License, Version 2.0 (the "License");
6  * you may not use this file except in compliance with the License.
7  * You may obtain a copy of the License at
8  *
9  * http://www.apache.org/licenses/LICENSE-2.0.txt
10  *
11  * Unless required by applicable law or agreed to in writing, software
12  * distributed under the License is distributed on an "AS IS" BASIS,
13  * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
14  * See the License for the specific language governing permissions and
15  * limitations under the License.
16  *
17  *=========================================================================*/
18 #ifndef __elxTransformixMain_H_
19 #define __elxTransformixMain_H_
20 
21 #include "elxElastixMain.h"
22 
23 namespace elastix
24 {
39 {
40 public:
41 
45  typedef itk::SmartPointer< Self > Pointer;
46  typedef itk::SmartPointer< const Self > ConstPointer;
47 
49  itkNewMacro( Self );
50 
52  itkTypeMacro( TransformixMain, ElastixMain );
53 
61 
71 
82 
86 
89 
91  int Run( void ) override;
92 
94  int Run( const ArgumentMapType & argmap ) override;
95 
96  int Run( const ArgumentMapType & argmap, const ParameterMapType & inputMap ) override;
97 
99  virtual int Run( const ArgumentMapType & argmap, const std::vector< ParameterMapType > & inputMaps );
100 
103  DataObjectContainerType * inputImageContainer );
104 
105 protected:
106 
108  ~TransformixMain() override;
109 
113  int InitDBIndex( void ) override;
114 
115 private:
116 
117  TransformixMain( const Self & ); // purposely not implemented
118  void operator=( const Self & ); // purposely not implemented
119 
120 };
121 
122 } // end namespace elastix
123 
124 #endif // end #ifndef __elxTransformixMain_h
A class with all functionality to configure elastix.
ConfigurationType::Pointer ConfigurationPointer
ComponentLoaderType::Pointer ComponentLoaderPointer
ComponentDatabaseType::IndexType DBIndexType
ObjectType::Pointer ObjectPointer
itk::DataObject DataObjectType
ComponentDatabaseType::PtrToCreator PtrToCreator
DataObjectType::Pointer DataObjectPointer
ComponentDatabase ComponentDatabaseType
ElastixBase ElastixBaseType
ComponentDatabaseType::ComponentDescriptionType ComponentDescriptionType
ComponentLoader ComponentLoaderType
ElastixBase::DataObjectContainerType DataObjectContainerType
ComponentDatabaseType::PixelTypeDescriptionType PixelTypeDescriptionType
ElastixBase::ObjectContainerType ObjectContainerType
ConfigurationType::CommandLineArgumentMapType ArgumentMapType
ComponentDatabaseType::Pointer ComponentDatabasePointer
ElastixBase::ConfigurationType ConfigurationType
itk::ParameterMapInterface::ParameterMapType ParameterMapType
ComponentDatabaseType::ImageDimensionType ImageDimensionType
ElastixBase::ObjectContainerPointer ObjectContainerPointer
ElastixBase::DataObjectContainerPointer DataObjectContainerPointer
A class with all functionality to configure transformix.
Superclass::ObjectContainerPointer ObjectContainerPointer
Superclass::DataObjectType DataObjectType
void operator=(const Self &)
Superclass::DataObjectContainerType DataObjectContainerType
TransformixMain(const Self &)
itk::SmartPointer< Self > Pointer
Superclass::ElastixBaseType ElastixBaseType
int Run(void) override
Superclass::DataObjectPointer DataObjectPointer
Superclass::ArgumentMapType ArgumentMapType
Superclass::ParameterMapType ParameterMapType
Superclass::ConfigurationType ConfigurationType
Superclass::PixelTypeDescriptionType PixelTypeDescriptionType
Superclass::ComponentDatabaseType ComponentDatabaseType
virtual int Run(const ArgumentMapType &argmap, const std::vector< ParameterMapType > &inputMaps)
Superclass::ObjectContainerType ObjectContainerType
Superclass::ComponentLoaderPointer ComponentLoaderPointer
Superclass::DataObjectContainerPointer DataObjectContainerPointer
Superclass::PtrToCreator PtrToCreator
int Run(const ArgumentMapType &argmap, const ParameterMapType &inputMap) override
Superclass::ComponentDescriptionType ComponentDescriptionType
itk::SmartPointer< const Self > ConstPointer
Superclass::DBIndexType DBIndexType
Superclass::ImageDimensionType ImageDimensionType
int InitDBIndex(void) override
Superclass::ComponentDatabasePointer ComponentDatabasePointer
Superclass::ObjectType ObjectType
virtual void SetInputImageContainer(DataObjectContainerType *inputImageContainer)
Superclass::ConfigurationPointer ConfigurationPointer
int Run(const ArgumentMapType &argmap) override
Superclass::ComponentLoaderType ComponentLoaderType
Superclass::ObjectPointer ObjectPointer


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